„Innovative bioinformatics: from bench to bedside"
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Date: 25.03.2025 r. |
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Venue: AGH Department of Computer Science, building D17, room 1.19 (ground floor), 21 Kawiory St., Krakow |
We would like to invite you to a meeting that will bring you closer to the topics related to the latest developments in bioinformatics, data science, genetics, machine learning and artificial intelligence! We will bring together the interesting worlds of medicine and computer science - showing the most interesting results of cooperation between the two disciplines. Our aim is to exchange knowledge and experience in the application of bioinformatics, artificial intelligence and data analysis.
Special guests will be specialists from the Medical University of Leiden (Netherlands). Leiden University is the oldest university in the Netherlands. Leiden University Medical Center is a modern medical centre with a research, educational mission and patient care. It focuses on social topics such as oncology, regenerative medicine or population health, contributing to solving key challenges in healthcare - the ageing population or the increase in chronic diseases.
Speakers at the event will focus on modern methods in bioinformatics - including gene mutation analysis, single cell sequencing and the use of artificial intelligence in medicine. Representatives from the AGH Department of Computer Science will show interesting applications of IT in medicine - especially for IT students who want to develop in this direction.
In the second part of the event, we invite you to lectures on such topics as functional differentiation of proteins, identification of pathogens in blood samples or the use of deep learning in drug discovery processes.
The conference provides an excellent opportunity to meet scientists, professionals and students interested in bioinformatics, data science, machine learning, AI and the role of computer science in the development of modern medicine.
The event will be held in English.
MEETING AGENDA:
10:00 - welcome to the guests – Dean of the Faculty of Informatics, prof. Marek Kisiel-Dorohinicki, D.Sc., Eng., Vice Dean for Cooperation, prof. Aleksander Byrski, D.Sc., Eng., Faculty of Informatics, AGH
10:00 - 10:15 - Katarzyna Heryan - AGH Department of Computer Science - "Purpose HealthTech development"
10:15 - 10:30 - dr Cornelis van Bergen - Leiden University Medical Center (The Netherlands) – “Accelerating Immunological Research: Single Cell Sequencing”
10:30 - 10:45 - Elżbieta Wierciak, Karol Wyrębkiewicz - AGH Department of Computer Science – “First Steps in Analyzing germline and Somatic Mutations in B-cells: A Bioinformatics Perspective”
10:45 - 11:00 - dr Gertjan Lugthart - Leiden University Medical Center (The Netherlands) – “Bio-informatics to solve clinical problems; connecting Bedside, Bench and Bio-informatics”
11:00 - 11:15 - Katarzyna Jurkowska - AGH Department of Computer Science – “Bioinformatics Approaches in the Analysis of Sequencing Data from Stem Cell Transplant Patients”
11:15 - 11:30 - dr Szymon Kiełbasa - Leiden University Medical Center (Netherlands) – “Applying bioinformatics methods over a long distance: first lessons”
11:30 - 12:00 - coffee break
12:30 – 12:45 - dr inż. Paweł Szczerbiak – Sano – Centre for Computational Personalised Medicine - “Frontiers of bioinformatics, clinic and AI: understanding protein structural and functional diversity”
12:45 – 13:00 - Jakub Wojciechowski - Sano – Centre for Computational Personalised Medicine – “Frontiers of bioinformatics, clinic and AI: Metagenomic uncovers molecular mechanisms of diseases”
13:00 – 13:15 - prof. Aleksander Mendyk, Ph.D. - Chair of Pharmaceutical Technology and Biopharmaceutics, Faculty of Pharmacy – Medical College Jagiellonian University – “Cross-sectional research at the Faculty of Pharmacy JUMC in Kraków - computer science in pharmaceutical world”
13:15 – 13:30 - dr hab. inż. Joanna Jaworek-Korjakowska, prof. AGH – Center of Excellence in Artificial Intelligence AGH – “Use of advanced deep solutions and multimodality in medical data analysis”
13:30 – 13:45 – Adam Pardyl - Faculty of Mathematics and Computer Science Jagiellonian University – “Rapid identification of pathogens in blood smears using computer vision”
13:45 – 14:00 - Adriana Borowa - Faculty of Mathematics and Computer Science Jagiellonian University – “Deep Learning Applications in Phenotypic Screening for Drug Discover”
